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            Abstract Coral reefs are in global decline primarily due to climate change. Herbivory is often viewed as key to maintaining coral‐dominated reefs, and herbivore management is gaining traction as a possible strategy for promoting reef resilience. The functional impact of herbivorous fishes has typically been inferred from total biomass, but robust estimates of ecological processes are needed to better inform management targets. Here, we provide a framework to calculate rates of herbivory across Pacific reefs. We synthesized available observations of foraging metrics in relation to fish body size and found considerable variation, even among closely related species. We then applied these allometric functions to survey data and calculated rates of herbivory for acanthurids and scarines, which make up the vast majority of herbivorous fish biomass in the Pacific. Estimated rates of algal consumption, area scraped, and bioerosion varied across islands, with noticeable differences that may align with the relative influence of human population density among underlying herbivore functional groups. We found no evidence of compensatory relationships among herbivore processes whereby decreasing rates in one type of herbivory is offset by increasing rates in another. We observed nonlinear, positive relationships between fish biomass and rates of herbivory. Yet, for a given biomass, the corresponding rates of herbivory varied among regions, and we observed instances where islands with the greatest biomass did not also have the highest rates of herbivory. Islands with the largest size classes of herbivores did not consistently exhibit greater rates of herbivory, and we did not find a clear, consistent pattern between the number of fish species and corresponding rates of herbivore processes. CroppingAcanthurusspp. provided the greatest proportion of algal consumption at every island, yet no single species accounted for the majority of this process, whereas we identified parrotfish species that provided >75% of scraping or bioerosion at certain islands. Our results emphasize the importance of considering the species and size composition of herbivore assemblages when estimating processes, rather than relying on total biomass alone. Lastly, we highlight gaps in foraging observations and additional work needed to further broaden our ability to quantify the ecological processes of herbivores.more » « less
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            Abstract Sustainably managing fisheries requires regular and reliable evaluation of stock status. However, most multispecies reef fisheries around the globe tend to lack research and monitoring capacity, preventing the estimation of sustainable reference points against which stocks can be assessed. Here, combining fish biomass data for >2000 coral reefs, we estimate site-specific sustainable reference points for coral reef fisheries and use these and available catch estimates to assess the status of global coral reef fish stocks. We reveal that >50% of sites and jurisdictions with available information have stocks of conservation concern, having failed at least one fisheries sustainability benchmark. We quantify the trade-offs between biodiversity, fish length, and ecosystem functions relative to key benchmarks and highlight the ecological benefits of increasing sustainability. Our approach yields multispecies sustainable reference points for coral reef fisheries using environmental conditions, a promising means for enhancing the sustainability of the world’s coral reef fisheries.more » « less
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            Abstract Humans have long sought to restore species but little attention has been directed at how to best select a subset of foundation species for maintaining rich assemblages that support ecosystems, like coral reefs and rainforests, which are increasingly threatened by environmental change.We propose a two‐part hedging approach that selects optimized sets of species for restoration. The first part acknowledges that biodiversity supports ecosystem functions and services, and so it ensures precaution against loss by allocating an even spread of phenotypic traits. The second part maximizes species and ecosystem persistence by weighting species based on characteristics that are known to improve ecological persistence—for example abundance, species range and tolerance to environmental change.Using existing phenotypic‐trait and ecological data for reef building corals, we identified sets of ecologically persistent species by examining marginal returns in occupancy of phenotypic trait space. We compared optimal sets of species with those from the world's southern‐most coral reef, which naturally harbours low coral diversity, to show these occupy much of the trait space. Comparison with an existing coral restoration program indicated that current corals used for restoration only cover part of the desired trait space and programs may be improved by including species with different traits.Synthesis and applications. While there are many possible criteria for selecting species for restoration, the approach proposed here addresses the need to insure against unpredictable losses of ecosystem services by focusing on a wide range of phenotypic traits and ecological characteristics. Furthermore, the flexibility of the approach enables the functional goals of restoration to vary depending on environmental context, stakeholder values, and the spatial and temporal scales at which meaningful impacts can be achieved.more » « less
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            ABSTRACT MotivationHere, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R package (BioTIMEr) to facilitate use of the database. Main Types of Variables IncludedThe database is composed of one main data table containing the abundance records and 11 metadata tables. The data are organised in a hierarchy of scales where 11,989,233 records are nested in 1,603,067 sample events, from 553,253 sampling locations, which are nested in 708 studies. A study is defined as a sampling methodology applied to an assemblage for a minimum of 2 years. Spatial Location and GrainSampling locations in BioTIME are distributed across the planet, including marine, terrestrial and freshwater realms. Spatial grain size and extent vary across studies depending on sampling methodology. We recommend gridding of sampling locations into areas of consistent size. Time Period and GrainThe earliest time series in BioTIME start in 1874, and the most recent records are from 2023. Temporal grain and duration vary across studies. We recommend doing sample‐level rarefaction to ensure consistent sampling effort through time before calculating any diversity metric. Major Taxa and Level of MeasurementThe database includes any eukaryotic taxa, with a combined total of 56,400 taxa. Software Formatcsv and. SQL.more » « lessFree, publicly-accessible full text available May 1, 2026
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            The worldwide decline of coral reefs necessitates targeting management solutions that can sustain reefs and the livelihoods of the people who depend on them. However, little is known about the context in which different reef management tools can help to achieve multiple social and ecological goals. Because of nonlinearities in the likelihood of achieving combined fisheries, ecological function, and biodiversity goals along a gradient of human pressure, relatively small changes in the context in which management is implemented could have substantial impacts on whether these goals are likely to be met. Critically, management can provide substantial conservation benefits to most reefs for fisheries and ecological function, but not biodiversity goals, given their degraded state and the levels of human pressure they face.more » « less
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